WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09E10.7.1 Sequence Name  R09E10.7.1
Length (nt)  5538   Chromosome Location  IV: 10286955-10293013
Chromosome . Primary Identifier  IV Chromosome Location . Start  10286955
Chromosome Location . End  10293013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09E10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004140 ebax-1 R09E10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09E10.7 R09E10.7 5154   IV: 10287006-10287065

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09E10.7.1 10286955 10293013 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140618   111   IV: 10286955-10287065 Caenorhabditis elegans
Exon140619   467   IV: 10287114-10287580 Caenorhabditis elegans
Exon140620   300   IV: 10287632-10287931 Caenorhabditis elegans
Exon140621   973   IV: 10287976-10288948 Caenorhabditis elegans
Exon140622   1214   IV: 10288995-10290208 Caenorhabditis elegans
Exon140623   228   IV: 10290256-10290483 Caenorhabditis elegans
Exon140624   886   IV: 10290530-10291415 Caenorhabditis elegans
Exon140625   429   IV: 10291467-10291895 Caenorhabditis elegans
Exon140626   146   IV: 10291943-10292088 Caenorhabditis elegans
Exon140627   145   IV: 10292135-10292279 Caenorhabditis elegans
Exon140628   129   IV: 10292327-10292455 Caenorhabditis elegans
Exon140629   510   IV: 10292504-10293013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09E10.7.1 10286955 10293013 1

1 Sequence

Length
5538

1 Sequence Ontology Term

Identifier Name Description
transcript