WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09E10.5.1 Sequence Name  R09E10.5.1
Length (nt)  4980   Chromosome Location  IV: 10295431-10302303
Chromosome . Primary Identifier  IV Chromosome Location . Start  10295431
Chromosome Location . End  10302303 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011175 R09E10.5 R09E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09E10.5 R09E10.5 4314   IV: 10296087-10296529

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09E10.5.1 10295431 10302303 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140636   1099   IV: 10295431-10296529 Caenorhabditis elegans
Exon140637   144   IV: 10296929-10297072 Caenorhabditis elegans
Exon140638   204   IV: 10297118-10297321 Caenorhabditis elegans
Exon140639   86   IV: 10297374-10297459 Caenorhabditis elegans
Exon140640   181   IV: 10297508-10297688 Caenorhabditis elegans
Exon140641   729   IV: 10297964-10298692 Caenorhabditis elegans
Exon140642   136   IV: 10298780-10298915 Caenorhabditis elegans
Exon140644   169   IV: 10299203-10299371 Caenorhabditis elegans
Exon140645   119   IV: 10299421-10299539 Caenorhabditis elegans
Exon140646   657   IV: 10299817-10300473 Caenorhabditis elegans
Exon140647   338   IV: 10300524-10300861 Caenorhabditis elegans
Exon140648   790   IV: 10301081-10301870 Caenorhabditis elegans
Exon140649   128   IV: 10301921-10302048 Caenorhabditis elegans
Exon140650   200   IV: 10302104-10302303 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09E10.5.1 10295431 10302303 -1

1 Sequence

Length
4980

1 Sequence Ontology Term

Identifier Name Description
transcript