WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1h.2 Sequence Name  K11E8.1h.2
Length (nt)  2692   Chromosome Location  IV: 10324254-10340566
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324254
Chromosome Location . End  10340566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1h.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1h K11E8.1h 1716   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1h.2 10324254 10340566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140756   872   IV: 10324254-10325125 Caenorhabditis elegans
Exon140788   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140811   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140832   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140849   114   IV: 10327602-10327715 Caenorhabditis elegans
Exon140870   105   IV: 10329097-10329201 Caenorhabditis elegans
Exon140892   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140900   153   IV: 10336112-10336264 Caenorhabditis elegans
Exon140911   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140925   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140939   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140953   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140967   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140987   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon141004   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon141022   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon141038   82   IV: 10340485-10340566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1h.2 10324254 10340566 -1

1 Sequence

Length
2692

1 Sequence Ontology Term

Identifier Name Description
transcript