WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1h.1 Sequence Name  K11E8.1h.1
Length (nt)  2683   Chromosome Location  IV: 10324325-10348956
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324325
Chromosome Location . End  10348956 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1h K11E8.1h 1716   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1h.1 10324325 10348956 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140770   801   IV: 10324325-10325125 Caenorhabditis elegans
Exon140787   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140810   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140831   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140848   114   IV: 10327602-10327715 Caenorhabditis elegans
Exon140869   105   IV: 10329097-10329201 Caenorhabditis elegans
Exon140891   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140899   153   IV: 10336112-10336264 Caenorhabditis elegans
Exon140910   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140924   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140938   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140952   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140966   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140986   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon141003   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon141021   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon141033   72   IV: 10340485-10340556 Caenorhabditis elegans
Exon141041   72   IV: 10348885-10348956 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1h.1 10324325 10348956 -1

1 Sequence

Length
2683

1 Sequence Ontology Term

Identifier Name Description
transcript