WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11A8.1a.1 Sequence Name  R11A8.1a.1
Length (nt)  1837   Chromosome Location  IV: 10355046-10357170
Chromosome . Primary Identifier  IV Chromosome Location . Start  10355046
Chromosome Location . End  10357170 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011236 R11A8.1 R11A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A8.1a R11A8.1a 1752   IV: 10355123-10355480

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.1a.1 10355046 10357170 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141007   435   IV: 10355046-10355480 Caenorhabditis elegans
Exon141009   170   IV: 10355530-10355699 Caenorhabditis elegans
Exon141011   159   IV: 10355753-10355911 Caenorhabditis elegans
Exon141013   771   IV: 10355962-10356732 Caenorhabditis elegans
Exon141015   93   IV: 10356777-10356869 Caenorhabditis elegans
Exon141016   118   IV: 10356912-10357029 Caenorhabditis elegans
Exon141018   91   IV: 10357080-10357170 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.1a.1 10355046 10357170 -1

1 Sequence

Length
1837

1 Sequence Ontology Term

Identifier Name Description
transcript