WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11A8.4b.1 Sequence Name  R11A8.4b.1
Length (nt)  1734   Chromosome Location  IV: 10363486-10366034
Chromosome . Primary Identifier  IV Chromosome Location . Start  10363486
Chromosome Location . End  10366034 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004800 sir-2.1 R11A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A8.4b R11A8.4b 1734   IV: 10363486-10363614

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.4b.1 10363486 10366034 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141032   129   IV: 10363486-10363614 Caenorhabditis elegans
Exon141034   195   IV: 10363761-10363955 Caenorhabditis elegans
Exon141036   882   IV: 10364044-10364925 Caenorhabditis elegans
Exon141038   285   IV: 10365380-10365664 Caenorhabditis elegans
Exon141040   129   IV: 10365721-10365849 Caenorhabditis elegans
Exon141041   114   IV: 10365921-10366034 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.4b.1 10363486 10366034 -1

1 Sequence

Length
1734

1 Sequence Ontology Term

Identifier Name Description
transcript