WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11A8.6.2 Sequence Name  R11A8.6.2
Length (nt)  3603   Chromosome Location  IV: 10368601-10373136
Chromosome . Primary Identifier  IV Chromosome Location . Start  10368601
Chromosome Location . End  10373136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002152 iars-1 R11A8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A8.6 R11A8.6 3426   IV: 10368615-10368718

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.6.2 10368601 10373136 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141050   118   IV: 10368601-10368718 Caenorhabditis elegans
Exon141053   889   IV: 10368780-10369668 Caenorhabditis elegans
Exon141055   515   IV: 10369719-10370233 Caenorhabditis elegans
Exon141057   250   IV: 10370303-10370552 Caenorhabditis elegans
Exon141059   261   IV: 10370600-10370860 Caenorhabditis elegans
Exon141061   639   IV: 10370914-10371552 Caenorhabditis elegans
Exon141063   519   IV: 10371603-10372121 Caenorhabditis elegans
Exon141065   126   IV: 10372175-10372300 Caenorhabditis elegans
Exon141066   281   IV: 10372357-10372637 Caenorhabditis elegans
Exon141070   5   IV: 10373132-10373136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.6.2 10368601 10373136 1

1 Sequence

Length
3603

1 Sequence Ontology Term

Identifier Name Description
transcript