WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10H10.3.1 Sequence Name  R10H10.3.1
Length (nt)  1168   Chromosome Location  IV: 10388505-10393294
Chromosome . Primary Identifier  IV Chromosome Location . Start  10388505
Chromosome Location . End  10393294 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10H10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011222 R10H10.3 R10H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10H10.3 R10H10.3 1095   IV: 10388520-10388597

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10H10.3.1 10388505 10393294 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141288   93   IV: 10388505-10388597 Caenorhabditis elegans
Exon141289   254   IV: 10388981-10389234 Caenorhabditis elegans
Exon141297   134   IV: 10392315-10392448 Caenorhabditis elegans
Exon141298   161   IV: 10392510-10392670 Caenorhabditis elegans
Exon141299   233   IV: 10392717-10392949 Caenorhabditis elegans
Exon141301   293   IV: 10393002-10393294 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10H10.3.1 10388505 10393294 1

1 Sequence

Length
1168

1 Sequence Ontology Term

Identifier Name Description
transcript