WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B12.3a.1 Sequence Name  F13B12.3a.1
Length (nt)  2356   Chromosome Location  IV: 10439123-10443830
Chromosome . Primary Identifier  IV Chromosome Location . Start  10439123
Chromosome Location . End  10443830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008731 F13B12.3 F13B12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B12.3a F13B12.3a 2154   IV: 10439209-10439292

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13B12.3a.1 10439123 10443830 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141352   170   IV: 10439123-10439292 Caenorhabditis elegans
Exon141354   78   IV: 10439369-10439446 Caenorhabditis elegans
Exon141356   173   IV: 10439724-10439896 Caenorhabditis elegans
Exon141359   61   IV: 10439954-10440014 Caenorhabditis elegans
Exon141360   83   IV: 10440392-10440474 Caenorhabditis elegans
Exon141362   172   IV: 10440706-10440877 Caenorhabditis elegans
Exon141364   72   IV: 10440926-10440997 Caenorhabditis elegans
Exon141366   134   IV: 10441294-10441427 Caenorhabditis elegans
Exon141369   226   IV: 10441582-10441807 Caenorhabditis elegans
Exon141371   243   IV: 10441858-10442100 Caenorhabditis elegans
Exon141373   187   IV: 10442146-10442332 Caenorhabditis elegans
Exon141375   77   IV: 10442634-10442710 Caenorhabditis elegans
Exon141377   83   IV: 10442761-10442843 Caenorhabditis elegans
Exon141379   72   IV: 10442913-10442984 Caenorhabditis elegans
Exon141381   286   IV: 10443031-10443316 Caenorhabditis elegans
Exon141384   239   IV: 10443592-10443830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13B12.3a.1 10439123 10443830 1

1 Sequence

Length
2356

1 Sequence Ontology Term

Identifier Name Description
transcript