WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B12.4a.2 Sequence Name  F13B12.4a.2
Length (nt)  1589   Chromosome Location  IV: 10444580-10448938
Chromosome . Primary Identifier  IV Chromosome Location . Start  10444580
Chromosome Location . End  10448938 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B12.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008732 F13B12.4 F13B12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B12.4a F13B12.4a 1308   IV: 10444771-10445005

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13B12.4a.2 10444580 10448938 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141389   426   IV: 10444580-10445005 Caenorhabditis elegans
Exon141393   590   IV: 10445204-10445793 Caenorhabditis elegans
Exon141396   173   IV: 10446096-10446268 Caenorhabditis elegans
Exon141399   198   IV: 10446437-10446634 Caenorhabditis elegans
Exon141402   114   IV: 10446691-10446804 Caenorhabditis elegans
Exon141404   88   IV: 10448851-10448938 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13B12.4a.2 10444580 10448938 -1

1 Sequence

Length
1589

1 Sequence Ontology Term

Identifier Name Description
transcript