WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F01D4.1a.1 Sequence Name  F01D4.1a.1
Length (nt)  1644   Chromosome Location  IV: 10465042-10467260
Chromosome . Primary Identifier  IV Chromosome Location . Start  10465042
Chromosome Location . End  10467260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01D4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008485 ugt-43 F01D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01D4.1a F01D4.1a 1623   IV: 10465043-10465216

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01D4.1a.1 10465042 10467260 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141446   175   IV: 10465042-10465216 Caenorhabditis elegans
Exon141447   98   IV: 10465325-10465422 Caenorhabditis elegans
Exon141449   131   IV: 10465494-10465624 Caenorhabditis elegans
Exon141451   491   IV: 10465669-10466159 Caenorhabditis elegans
Exon141453   92   IV: 10466233-10466324 Caenorhabditis elegans
Exon141455   657   IV: 10466604-10467260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01D4.1a.1 10465042 10467260 1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
transcript