WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F4.1.1 Sequence Name  C02F4.1.1
Length (nt)  5644   Chromosome Location  IV: 10484110-10492913
Chromosome . Primary Identifier  IV Chromosome Location . Start  10484110
Chromosome Location . End  10492913 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000419 ced-5 C02F4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F4.1 C02F4.1 5346   IV: 10484125-10484155

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.1.1 10484110 10492913 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141503   46   IV: 10484110-10484155 Caenorhabditis elegans
Exon141504   357   IV: 10484199-10484555 Caenorhabditis elegans
Exon141505   194   IV: 10484605-10484798 Caenorhabditis elegans
Exon141506   137   IV: 10484846-10484982 Caenorhabditis elegans
Exon141507   218   IV: 10485030-10485247 Caenorhabditis elegans
Exon141508   1089   IV: 10485476-10486564 Caenorhabditis elegans
Exon141509   79   IV: 10486881-10486959 Caenorhabditis elegans
Exon141510   132   IV: 10487008-10487139 Caenorhabditis elegans
Exon141511   286   IV: 10487302-10487587 Caenorhabditis elegans
Exon141512   162   IV: 10487684-10487845 Caenorhabditis elegans
Exon141513   317   IV: 10487892-10488208 Caenorhabditis elegans
Exon141514   76   IV: 10489034-10489109 Caenorhabditis elegans
Exon141515   157   IV: 10489469-10489625 Caenorhabditis elegans
Exon141516   410   IV: 10489673-10490082 Caenorhabditis elegans
Exon141517   132   IV: 10490737-10490868 Caenorhabditis elegans
Exon141518   213   IV: 10490916-10491128 Caenorhabditis elegans
Exon141519   345   IV: 10491173-10491517 Caenorhabditis elegans
Exon141520   740   IV: 10491566-10492305 Caenorhabditis elegans
Exon141521   554   IV: 10492360-10492913 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.1.1 10484110 10492913 1

1 Sequence

Length
5644

1 Sequence Ontology Term

Identifier Name Description
transcript