WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F4.2a.2 Sequence Name  C02F4.2a.2
Length (nt)  2668   Chromosome Location  IV: 10492869-10501127
Chromosome . Primary Identifier  IV Chromosome Location . Start  10492869
Chromosome Location . End  10501127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F4.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006527 tax-6 C02F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F4.2a C02F4.2a 1608   IV: 10493862-10494052

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.2a.2 10492869 10501127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141524   1184   IV: 10492869-10494052 Caenorhabditis elegans
Exon141531   98   IV: 10494831-10494928 Caenorhabditis elegans
Exon141533   85   IV: 10495182-10495266 Caenorhabditis elegans
Exon141539   78   IV: 10497968-10498045 Caenorhabditis elegans
Exon141544   126   IV: 10498091-10498216 Caenorhabditis elegans
Exon141549   95   IV: 10498319-10498413 Caenorhabditis elegans
Exon141554   78   IV: 10498490-10498567 Caenorhabditis elegans
Exon141559   140   IV: 10498616-10498755 Caenorhabditis elegans
Exon141564   486   IV: 10499076-10499561 Caenorhabditis elegans
Exon141569   101   IV: 10499609-10499709 Caenorhabditis elegans
Exon141575   90   IV: 10500446-10500535 Caenorhabditis elegans
Exon141582   107   IV: 10501021-10501127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.2a.2 10492869 10501127 -1

1 Sequence

Length
2668

1 Sequence Ontology Term

Identifier Name Description
transcript