WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F4.2b.1 Sequence Name  C02F4.2b.1
Length (nt)  1638   Chromosome Location  IV: 10493862-10501060
Chromosome . Primary Identifier  IV Chromosome Location . Start  10493862
Chromosome Location . End  10501060 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006527 tax-6 C02F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F4.2b C02F4.2b 1638   IV: 10493862-10494052

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.2b.1 10493862 10501060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141526   191   IV: 10493862-10494052 Caenorhabditis elegans
Exon141527   119   IV: 10494509-10494627 Caenorhabditis elegans
Exon141534   85   IV: 10495182-10495266 Caenorhabditis elegans
Exon141537   9   IV: 10496534-10496542 Caenorhabditis elegans
Exon141540   78   IV: 10497968-10498045 Caenorhabditis elegans
Exon141545   126   IV: 10498091-10498216 Caenorhabditis elegans
Exon141550   95   IV: 10498319-10498413 Caenorhabditis elegans
Exon141555   78   IV: 10498490-10498567 Caenorhabditis elegans
Exon141560   140   IV: 10498616-10498755 Caenorhabditis elegans
Exon141565   486   IV: 10499076-10499561 Caenorhabditis elegans
Exon141570   101   IV: 10499609-10499709 Caenorhabditis elegans
Exon141576   90   IV: 10500446-10500535 Caenorhabditis elegans
Exon141579   40   IV: 10501021-10501060 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.2b.1 10493862 10501060 -1

1 Sequence

Length
1638

1 Sequence Ontology Term

Identifier Name Description
transcript