WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F4.1.1 Sequence Name  C02F4.1.1
Length (nt)  5644   Chromosome Location  IV: 10484110-10492913
Chromosome . Primary Identifier  IV Chromosome Location . Start  10484110
Chromosome Location . End  10492913 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000419 ced-5 C02F4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F4.1 C02F4.1 5346   IV: 10484125-10484155

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.1.1 10484110 10492913 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141558   46   IV: 10484110-10484155 Caenorhabditis elegans
Exon141559   357   IV: 10484199-10484555 Caenorhabditis elegans
Exon141560   194   IV: 10484605-10484798 Caenorhabditis elegans
Exon141561   137   IV: 10484846-10484982 Caenorhabditis elegans
Exon141562   218   IV: 10485030-10485247 Caenorhabditis elegans
Exon141563   1089   IV: 10485476-10486564 Caenorhabditis elegans
Exon141564   79   IV: 10486881-10486959 Caenorhabditis elegans
Exon141565   132   IV: 10487008-10487139 Caenorhabditis elegans
Exon141566   286   IV: 10487302-10487587 Caenorhabditis elegans
Exon141567   162   IV: 10487684-10487845 Caenorhabditis elegans
Exon141568   317   IV: 10487892-10488208 Caenorhabditis elegans
Exon141569   76   IV: 10489034-10489109 Caenorhabditis elegans
Exon141570   157   IV: 10489469-10489625 Caenorhabditis elegans
Exon141571   410   IV: 10489673-10490082 Caenorhabditis elegans
Exon141572   132   IV: 10490737-10490868 Caenorhabditis elegans
Exon141573   213   IV: 10490916-10491128 Caenorhabditis elegans
Exon141574   345   IV: 10491173-10491517 Caenorhabditis elegans
Exon141575   740   IV: 10491566-10492305 Caenorhabditis elegans
Exon141576   554   IV: 10492360-10492913 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F4.1.1 10484110 10492913 1

1 Sequence

Length
5644

1 Sequence Ontology Term

Identifier Name Description
transcript