WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07G12.1a Sequence Name  T07G12.1a
Length (nt)  711   Chromosome Location  IV: 10525301-10525341
Chromosome . Primary Identifier  IV Chromosome Location . Start  10525301
Chromosome Location . End  10525341
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07G12.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43875 CAL-4, isoform a 26.8 236 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052782
WBRNAi00018388
WBRNAi00076661
WBRNAi00035317

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07G12.1a 10525301 10525341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000288 cal-4 T07G12.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07G12.1a 10525301 10525341 1
CDS:T07G12.1a 10526099 10526205 1
CDS:T07G12.1a 10529493 10529811 1
CDS:T07G12.1a 10529976 10530111 1
CDS:T07G12.1a 10530212 10530319 1

1 Sequence

Length
711

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07G12.1a.1 T07G12.1a.1 1488   IV: 10524803-10530598