WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07G12.2.1 Sequence Name  T07G12.2.1
Length (nt)  1705   Chromosome Location  IV: 10530709-10532915
Chromosome . Primary Identifier  IV Chromosome Location . Start  10530709
Chromosome Location . End  10532915 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07G12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011593 T07G12.2 T07G12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07G12.2 T07G12.2 1635   IV: 10530752-10530921

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07G12.2.1 10530709 10532915 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141618   213   IV: 10530709-10530921 Caenorhabditis elegans
Exon141619   72   IV: 10531111-10531182 Caenorhabditis elegans
Exon141620   118   IV: 10531230-10531347 Caenorhabditis elegans
Exon141621   303   IV: 10531475-10531777 Caenorhabditis elegans
Exon141622   241   IV: 10531824-10532064 Caenorhabditis elegans
Exon141623   161   IV: 10532112-10532272 Caenorhabditis elegans
Exon141624   597   IV: 10532319-10532915 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07G12.2.1 10530709 10532915 1

1 Sequence

Length
1705

1 Sequence Ontology Term

Identifier Name Description
transcript