WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07G12.3.1 Sequence Name  T07G12.3.1
Length (nt)  1916   Chromosome Location  IV: 10533939-10536451
Chromosome . Primary Identifier  IV Chromosome Location . Start  10533939
Chromosome Location . End  10536451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07G12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011594 T07G12.3 T07G12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07G12.3 T07G12.3 1872   IV: 10533962-10534058

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07G12.3.1 10533939 10536451 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141625   120   IV: 10533939-10534058 Caenorhabditis elegans
Exon141626   205   IV: 10534173-10534377 Caenorhabditis elegans
Exon141627   147   IV: 10534444-10534590 Caenorhabditis elegans
Exon141628   331   IV: 10534720-10535050 Caenorhabditis elegans
Exon141629   220   IV: 10535094-10535313 Caenorhabditis elegans
Exon141630   167   IV: 10535358-10535524 Caenorhabditis elegans
Exon141631   171   IV: 10535572-10535742 Caenorhabditis elegans
Exon141632   164   IV: 10535796-10535959 Caenorhabditis elegans
Exon141633   106   IV: 10536013-10536118 Caenorhabditis elegans
Exon141634   285   IV: 10536167-10536451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07G12.3.1 10533939 10536451 1

1 Sequence

Length
1916

1 Sequence Ontology Term

Identifier Name Description
transcript