WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07G12.5c Sequence Name  T07G12.5c
Length (nt)  1329   Chromosome Location  IV: 10541538-10541884
Chromosome . Primary Identifier  IV Chromosome Location . Start  10541538
Chromosome Location . End  10541884
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07G12.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49785 SVCT-1, isoform c 48.6 442 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052792
WBRNAi00018395
WBRNAi00035321

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07G12.5c 10541538 10541884 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011596 svct-1 T07G12.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07G12.5c 10541538 10541884 -1
CDS:T07G12.5c 10541956 10542058 -1
CDS:T07G12.5c 10542112 10542276 -1
CDS:T07G12.5c 10542729 10542889 -1
CDS:T07G12.5c 10542964 10543204 -1
CDS:T07G12.5c 10543251 10543374 -1
CDS:T07G12.5c 10543742 10543920 -1
CDS:T07G12.5c 10543974 10543982 -1

1 Sequence

Length
1329

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07G12.5c.1 T07G12.5c.1 1329   IV: 10541538-10543982