WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07G12.10.3 Sequence Name  T07G12.10.3
Length (nt)  2308   Chromosome Location  IV: 10555247-10558225
Chromosome . Primary Identifier  IV Chromosome Location . Start  10555247
Chromosome Location . End  10558225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07G12.10.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011600 zim-2 T07G12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07G12.10 T07G12.10 1755   IV: 10555649-10555747

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07G12.10.3 10555247 10558225 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141699   501   IV: 10555247-10555747 Caenorhabditis elegans
Exon141708   791   IV: 10555810-10556600 Caenorhabditis elegans
Exon141711   280   IV: 10556899-10557178 Caenorhabditis elegans
Exon141714   261   IV: 10557251-10557511 Caenorhabditis elegans
Exon141717   194   IV: 10557603-10557796 Caenorhabditis elegans
Exon141720   53   IV: 10557848-10557900 Caenorhabditis elegans
Exon141722   127   IV: 10557948-10558074 Caenorhabditis elegans
Exon141725   101   IV: 10558125-10558225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07G12.10.3 10555247 10558225 1

1 Sequence

Length
2308

1 Sequence Ontology Term

Identifier Name Description
transcript