WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07G12.11b Sequence Name  T07G12.11b
Length (nt)  1728   Chromosome Location  IV: 10558721-10558819
Chromosome . Primary Identifier  IV Chromosome Location . Start  10558721
Chromosome Location . End  10558819
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07G12.11b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21166 ZIM-3, isoform b 65.2 575 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00007851
WBRNAi00052783
WBRNAi00052784
WBRNAi00052785
WBRNAi00052786
WBRNAi00008189
WBRNAi00018389
WBRNAi00018390
WBRNAi00018399
WBRNAi00098037
WBRNAi00035318
WBRNAi00098075
WBRNAi00098077
WBRNAi00098076
WBRNAi00007864
WBRNAi00097670
WBRNAi00097680
WBRNAi00084850

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07G12.11b 10558721 10558819 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011601 zim-3 T07G12.11 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07G12.11b 10558721 10558819 1
CDS:T07G12.11b 10558883 10559604 1
CDS:T07G12.11b 10559762 10560023 1
CDS:T07G12.11b 10560110 10560361 1
CDS:T07G12.11b 10560442 10560635 1
CDS:T07G12.11b 10560684 10560745 1
CDS:T07G12.11b 10560791 10560926 1
CDS:T07G12.11b 10560976 10560976 1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07G12.11b.1 T07G12.11b.1 2187   IV: 10558715-10561429