WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43F9.8.1 Sequence Name  C43F9.8.1
Length (nt)  957   Chromosome Location  IV: 10576350-10578288
Chromosome . Primary Identifier  IV Chromosome Location . Start  10576350
Chromosome Location . End  10578288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43F9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43F9.8 C43F9.8 657   IV: 10576389-10576483

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43F9.8.1 10576350 10578288 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141756   134   IV: 10576350-10576483 Caenorhabditis elegans
Exon141757   193   IV: 10577140-10577332 Caenorhabditis elegans
Exon141758   85   IV: 10577521-10577605 Caenorhabditis elegans
Exon141759   210   IV: 10577663-10577872 Caenorhabditis elegans
Exon141760   335   IV: 10577954-10578288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43F9.8.1 10576350 10578288 1

1 Sequence

Length
957

1 Sequence Ontology Term

Identifier Name Description
transcript