WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43F9.9.2 Sequence Name  C43F9.9.2
Length (nt)  2179   Chromosome Location  IV: 10578675-10581801
Chromosome . Primary Identifier  IV Chromosome Location . Start  10578675
Chromosome Location . End  10581801 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43F9.9.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008076 lgc-43 C43F9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43F9.9 C43F9.9 2040   IV: 10578786-10578858

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43F9.9.2 10578675 10581801 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141762   184   IV: 10578675-10578858 Caenorhabditis elegans
Exon141765   95   IV: 10578977-10579071 Caenorhabditis elegans
Exon141767   580   IV: 10579122-10579701 Caenorhabditis elegans
Exon141770   273   IV: 10579753-10580025 Caenorhabditis elegans
Exon141772   115   IV: 10580073-10580187 Caenorhabditis elegans
Exon141774   174   IV: 10580329-10580502 Caenorhabditis elegans
Exon141776   83   IV: 10580557-10580639 Caenorhabditis elegans
Exon141778   132   IV: 10580689-10580820 Caenorhabditis elegans
Exon141780   161   IV: 10580966-10581126 Caenorhabditis elegans
Exon141782   382   IV: 10581420-10581801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43F9.9.2 10578675 10581801 1

1 Sequence

Length
2179

1 Sequence Ontology Term

Identifier Name Description
transcript