WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43F9.9.1 Sequence Name  C43F9.9.1
Length (nt)  2107   Chromosome Location  IV: 10578667-10581801
Chromosome . Primary Identifier  IV Chromosome Location . Start  10578667
Chromosome Location . End  10581801 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43F9.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008076 lgc-43 C43F9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43F9.9 C43F9.9 2040   IV: 10578786-10578858

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43F9.9.1 10578667 10581801 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141816   16   IV: 10578667-10578682 Caenorhabditis elegans
Exon141818   96   IV: 10578763-10578858 Caenorhabditis elegans
Exon141819   95   IV: 10578977-10579071 Caenorhabditis elegans
Exon141821   580   IV: 10579122-10579701 Caenorhabditis elegans
Exon141824   273   IV: 10579753-10580025 Caenorhabditis elegans
Exon141826   115   IV: 10580073-10580187 Caenorhabditis elegans
Exon141828   174   IV: 10580329-10580502 Caenorhabditis elegans
Exon141830   83   IV: 10580557-10580639 Caenorhabditis elegans
Exon141832   132   IV: 10580689-10580820 Caenorhabditis elegans
Exon141834   161   IV: 10580966-10581126 Caenorhabditis elegans
Exon141836   382   IV: 10581420-10581801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43F9.9.1 10578667 10581801 1

1 Sequence

Length
2107

1 Sequence Ontology Term

Identifier Name Description
transcript