WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09H10.5.1 Sequence Name  R09H10.5.1
Length (nt)  4982   Chromosome Location  IV: 10621744-10628829
Chromosome . Primary Identifier  IV Chromosome Location . Start  10621744
Chromosome Location . End  10628829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09H10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011182 R09H10.5 R09H10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09H10.5 R09H10.5 4866   IV: 10621845-10621858

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09H10.5.1 10621744 10628829 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141902   115   IV: 10621744-10621858 Caenorhabditis elegans
Exon141903   162   IV: 10621910-10622071 Caenorhabditis elegans
Exon141904   531   IV: 10622146-10622676 Caenorhabditis elegans
Exon141905   172   IV: 10622739-10622910 Caenorhabditis elegans
Exon141906   120   IV: 10622955-10623074 Caenorhabditis elegans
Exon141907   1109   IV: 10623166-10624274 Caenorhabditis elegans
Exon141908   139   IV: 10624319-10624457 Caenorhabditis elegans
Exon141909   181   IV: 10624504-10624684 Caenorhabditis elegans
Exon141910   427   IV: 10624860-10625286 Caenorhabditis elegans
Exon141911   207   IV: 10625338-10625544 Caenorhabditis elegans
Exon141912   415   IV: 10625590-10626004 Caenorhabditis elegans
Exon141913   65   IV: 10626056-10626120 Caenorhabditis elegans
Exon141914   148   IV: 10626167-10626314 Caenorhabditis elegans
Exon141915   132   IV: 10626362-10626493 Caenorhabditis elegans
Exon141916   139   IV: 10626535-10626673 Caenorhabditis elegans
Exon141917   133   IV: 10626745-10626877 Caenorhabditis elegans
Exon141918   192   IV: 10626921-10627112 Caenorhabditis elegans
Exon141919   77   IV: 10627167-10627243 Caenorhabditis elegans
Exon141920   145   IV: 10627290-10627434 Caenorhabditis elegans
Exon141921   134   IV: 10627625-10627758 Caenorhabditis elegans
Exon141922   53   IV: 10628226-10628278 Caenorhabditis elegans
Exon141923   119   IV: 10628329-10628447 Caenorhabditis elegans
Exon141924   67   IV: 10628763-10628829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09H10.5.1 10621744 10628829 -1

1 Sequence

Length
4982

1 Sequence Ontology Term

Identifier Name Description
transcript