WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C4.2.1 Sequence Name  F56C4.2.1
Length (nt)  694   Chromosome Location  IV: 10639277-10642784
Chromosome . Primary Identifier  IV Chromosome Location . Start  10639277
Chromosome Location . End  10642784 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010145 F56C4.2 F56C4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C4.2 F56C4.2 600   IV: 10639277-10639387

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C4.2.1 10639277 10642784 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141936   111   IV: 10639277-10639387 Caenorhabditis elegans
Exon141937   159   IV: 10641482-10641640 Caenorhabditis elegans
Exon141939   118   IV: 10642266-10642383 Caenorhabditis elegans
Exon141940   103   IV: 10642432-10642534 Caenorhabditis elegans
Exon141941   203   IV: 10642582-10642784 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C4.2.1 10639277 10642784 1

1 Sequence

Length
694

1 Sequence Ontology Term

Identifier Name Description
transcript