WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C4.3a.1 Sequence Name  F56C4.3a.1
Length (nt)  1151   Chromosome Location  IV: 10642716-10647091
Chromosome . Primary Identifier  IV Chromosome Location . Start  10642716
Chromosome Location . End  10647091 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010146 glb-19 F56C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C4.3a F56C4.3a 672   IV: 10642912-10642935

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C4.3a.1 10642716 10647091 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141942   220   IV: 10642716-10642935 Caenorhabditis elegans
Exon141946   114   IV: 10643484-10643597 Caenorhabditis elegans
Exon141950   142   IV: 10643646-10643787 Caenorhabditis elegans
Exon141954   107   IV: 10644452-10644558 Caenorhabditis elegans
Exon141958   102   IV: 10644607-10644708 Caenorhabditis elegans
Exon141963   144   IV: 10645148-10645291 Caenorhabditis elegans
Exon141966   322   IV: 10646770-10647091 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C4.3a.1 10642716 10647091 -1

1 Sequence

Length
1151

1 Sequence Ontology Term

Identifier Name Description
transcript