WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08C7.3e.1 Sequence Name  K08C7.3e.1
Length (nt)  11185   Chromosome Location  IV: 10666823-10679289
Chromosome . Primary Identifier  IV Chromosome Location . Start  10666823
Chromosome Location . End  10679289 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08C7.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3e K08C7.3e 11088   IV: 10666833-10667028

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3e.1 10666823 10679289 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142005   206   IV: 10666823-10667028 Caenorhabditis elegans
Exon142015   656   IV: 10667111-10667766 Caenorhabditis elegans
Exon142021   835   IV: 10667874-10668708 Caenorhabditis elegans
Exon142027   1874   IV: 10668756-10670629 Caenorhabditis elegans
Exon142033   183   IV: 10670676-10670858 Caenorhabditis elegans
Exon142036   127   IV: 10670910-10671036 Caenorhabditis elegans
Exon142047   480   IV: 10671351-10671830 Caenorhabditis elegans
Exon142053   491   IV: 10671879-10672369 Caenorhabditis elegans
Exon142059   2214   IV: 10672418-10674631 Caenorhabditis elegans
Exon142065   1881   IV: 10674680-10676560 Caenorhabditis elegans
Exon142071   900   IV: 10676703-10677602 Caenorhabditis elegans
Exon142074   96   IV: 10677674-10677769 Caenorhabditis elegans
Exon142080   134   IV: 10677933-10678066 Caenorhabditis elegans
Exon142086   730   IV: 10678116-10678845 Caenorhabditis elegans
Exon142091   378   IV: 10678912-10679289 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3e.1 10666823 10679289 1

1 Sequence

Length
11185

1 Sequence Ontology Term

Identifier Name Description
transcript