WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:K08C7.3f.1 Sequence Name  K08C7.3f.1
Length (nt)  11233   Chromosome Location  IV: 10666833-10679287
Chromosome . Primary Identifier  IV Chromosome Location . Start  10666833
Chromosome Location . End  10679287 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08C7.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3f K08C7.3f 11148   IV: 10666833-10667028

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3f.1 10666833 10679287 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142009   196   IV: 10666833-10667028 Caenorhabditis elegans
Exon142016   656   IV: 10667111-10667766 Caenorhabditis elegans
Exon142022   835   IV: 10667874-10668708 Caenorhabditis elegans
Exon142028   1874   IV: 10668756-10670629 Caenorhabditis elegans
Exon142034   183   IV: 10670676-10670858 Caenorhabditis elegans
Exon142040   154   IV: 10670910-10671063 Caenorhabditis elegans
Exon142042   33   IV: 10671209-10671241 Caenorhabditis elegans
Exon142048   480   IV: 10671351-10671830 Caenorhabditis elegans
Exon142054   491   IV: 10671879-10672369 Caenorhabditis elegans
Exon142060   2214   IV: 10672418-10674631 Caenorhabditis elegans
Exon142066   1881   IV: 10674680-10676560 Caenorhabditis elegans
Exon142072   900   IV: 10676703-10677602 Caenorhabditis elegans
Exon142075   96   IV: 10677674-10677769 Caenorhabditis elegans
Exon142081   134   IV: 10677933-10678066 Caenorhabditis elegans
Exon142087   730   IV: 10678116-10678845 Caenorhabditis elegans
Exon142088   376   IV: 10678912-10679287 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3f.1 10666833 10679287 1

1 Sequence

Length
11233

1 Sequence Ontology Term

Identifier Name Description
transcript