WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08C7.3a.1 Sequence Name  K08C7.3a.1
Length (nt)  11208   Chromosome Location  IV: 10666827-10679289
Chromosome . Primary Identifier  IV Chromosome Location . Start  10666827
Chromosome Location . End  10679289 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08C7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3a K08C7.3a 11115   IV: 10666833-10667028

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3a.1 10666827 10679289 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142061   202   IV: 10666827-10667028 Caenorhabditis elegans
Exon142066   656   IV: 10667111-10667766 Caenorhabditis elegans
Exon142072   835   IV: 10667874-10668708 Caenorhabditis elegans
Exon142078   1874   IV: 10668756-10670629 Caenorhabditis elegans
Exon142084   183   IV: 10670676-10670858 Caenorhabditis elegans
Exon142092   154   IV: 10670910-10671063 Caenorhabditis elegans
Exon142098   480   IV: 10671351-10671830 Caenorhabditis elegans
Exon142104   491   IV: 10671879-10672369 Caenorhabditis elegans
Exon142110   2214   IV: 10672418-10674631 Caenorhabditis elegans
Exon142116   1881   IV: 10674680-10676560 Caenorhabditis elegans
Exon142122   900   IV: 10676703-10677602 Caenorhabditis elegans
Exon142128   96   IV: 10677674-10677769 Caenorhabditis elegans
Exon142131   134   IV: 10677933-10678066 Caenorhabditis elegans
Exon142137   730   IV: 10678116-10678845 Caenorhabditis elegans
Exon142144   378   IV: 10678912-10679289 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3a.1 10666827 10679289 1

1 Sequence

Length
11208

1 Sequence Ontology Term

Identifier Name Description
transcript