WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08C7.3d.1 Sequence Name  K08C7.3d.1
Length (nt)  11087   Chromosome Location  IV: 10666827-10679291
Chromosome . Primary Identifier  IV Chromosome Location . Start  10666827
Chromosome Location . End  10679291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08C7.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3d K08C7.3d 10992   IV: 10666833-10667028

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3d.1 10666827 10679291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142063   202   IV: 10666827-10667028 Caenorhabditis elegans
Exon142069   656   IV: 10667111-10667766 Caenorhabditis elegans
Exon142075   835   IV: 10667874-10668708 Caenorhabditis elegans
Exon142081   1874   IV: 10668756-10670629 Caenorhabditis elegans
Exon142087   183   IV: 10670676-10670858 Caenorhabditis elegans
Exon142090   127   IV: 10670910-10671036 Caenorhabditis elegans
Exon142101   480   IV: 10671351-10671830 Caenorhabditis elegans
Exon142107   491   IV: 10671879-10672369 Caenorhabditis elegans
Exon142113   2214   IV: 10672418-10674631 Caenorhabditis elegans
Exon142119   1881   IV: 10674680-10676560 Caenorhabditis elegans
Exon142125   900   IV: 10676703-10677602 Caenorhabditis elegans
Exon142134   134   IV: 10677933-10678066 Caenorhabditis elegans
Exon142140   730   IV: 10678116-10678845 Caenorhabditis elegans
Exon142148   380   IV: 10678912-10679291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08C7.3d.1 10666827 10679291 1

1 Sequence

Length
11087

1 Sequence Ontology Term

Identifier Name Description
transcript