WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC168.1.1 Sequence Name  ZC168.1.1
Length (nt)  2737   Chromosome Location  IV: 10716648-10721755
Chromosome . Primary Identifier  IV Chromosome Location . Start  10716648
Chromosome Location . End  10721755 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC168.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003568 ncx-3 ZC168.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC168.1 ZC168.1 2493   IV: 10716656-10716767

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC168.1.1 10716648 10721755 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142249   120   IV: 10716648-10716767 Caenorhabditis elegans
Exon142250   419   IV: 10716969-10717387 Caenorhabditis elegans
Exon142251   505   IV: 10717943-10718447 Caenorhabditis elegans
Exon142252   71   IV: 10718859-10718929 Caenorhabditis elegans
Exon142253   135   IV: 10719192-10719326 Caenorhabditis elegans
Exon142254   192   IV: 10719379-10719570 Caenorhabditis elegans
Exon142255   711   IV: 10719745-10720455 Caenorhabditis elegans
Exon142256   152   IV: 10720998-10721149 Caenorhabditis elegans
Exon142257   432   IV: 10721324-10721755 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC168.1.1 10716648 10721755 1

1 Sequence

Length
2737

1 Sequence Ontology Term

Identifier Name Description
transcript