WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B9.3a.1 Sequence Name  T25B9.3a.1
Length (nt)  946   Chromosome Location  IV: 10744775-10748401
Chromosome . Primary Identifier  IV Chromosome Location . Start  10744775
Chromosome Location . End  10748401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012009 T25B9.3 T25B9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.3a T25B9.3a 792   IV: 10744781-10745008

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.3a.1 10744775 10748401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142284   234   IV: 10744775-10745008 Caenorhabditis elegans
Exon142286   111   IV: 10746291-10746401 Caenorhabditis elegans
Exon142287   141   IV: 10746665-10746805 Caenorhabditis elegans
Exon142289   135   IV: 10747724-10747858 Caenorhabditis elegans
Exon142292   325   IV: 10748077-10748401 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.3a.1 10744775 10748401 1

1 Sequence

Length
946

1 Sequence Ontology Term

Identifier Name Description
transcript