WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B9.1.1 Sequence Name  T25B9.1.1
Length (nt)  1285   Chromosome Location  IV: 10748378-10750141
Chromosome . Primary Identifier  IV Chromosome Location . Start  10748378
Chromosome Location . End  10750141 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012007 T25B9.1 T25B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.1 T25B9.1 1212   IV: 10748412-10748750

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.1.1 10748378 10750141 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142293   373   IV: 10748378-10748750 Caenorhabditis elegans
Exon142294   250   IV: 10748798-10749047 Caenorhabditis elegans
Exon142295   91   IV: 10749088-10749178 Caenorhabditis elegans
Exon142296   400   IV: 10749474-10749873 Caenorhabditis elegans
Exon142297   171   IV: 10749971-10750141 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.1.1 10748378 10750141 -1

1 Sequence

Length
1285

1 Sequence Ontology Term

Identifier Name Description
transcript