WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B9.5a.1 Sequence Name  T25B9.5a.1
Length (nt)  1697   Chromosome Location  IV: 10752359-10754589
Chromosome . Primary Identifier  IV Chromosome Location . Start  10752359
Chromosome Location . End  10754589 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012011 T25B9.5 T25B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.5a T25B9.5a 1626   IV: 10752430-10752678

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.5a.1 10752359 10754589 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142303   320   IV: 10752359-10752678 Caenorhabditis elegans
Exon142304   129   IV: 10752728-10752856 Caenorhabditis elegans
Exon142306   456   IV: 10752906-10753361 Caenorhabditis elegans
Exon142308   402   IV: 10753406-10753807 Caenorhabditis elegans
Exon142310   213   IV: 10753859-10754071 Caenorhabditis elegans
Exon142312   123   IV: 10754350-10754472 Caenorhabditis elegans
Exon142314   54   IV: 10754536-10754589 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.5a.1 10752359 10754589 -1

1 Sequence

Length
1697

1 Sequence Ontology Term

Identifier Name Description
transcript