WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B9.7.1 Sequence Name  T25B9.7.1
Length (nt)  1677   Chromosome Location  IV: 10761698-10764415
Chromosome . Primary Identifier  IV Chromosome Location . Start  10761698
Chromosome Location . End  10764415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012013 ugt-54 T25B9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.7 T25B9.7 1584   IV: 10761723-10761866

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.7.1 10761698 10764415 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142341   169   IV: 10761698-10761866 Caenorhabditis elegans
Exon142342   199   IV: 10761931-10762129 Caenorhabditis elegans
Exon142343   126   IV: 10762180-10762305 Caenorhabditis elegans
Exon142344   75   IV: 10762359-10762433 Caenorhabditis elegans
Exon142345   107   IV: 10762481-10762587 Caenorhabditis elegans
Exon142346   177   IV: 10762639-10762815 Caenorhabditis elegans
Exon142347   238   IV: 10762860-10763097 Caenorhabditis elegans
Exon142348   126   IV: 10763736-10763861 Caenorhabditis elegans
Exon142349   209   IV: 10763910-10764118 Caenorhabditis elegans
Exon142350   251   IV: 10764165-10764415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.7.1 10761698 10764415 1

1 Sequence

Length
1677

1 Sequence Ontology Term

Identifier Name Description
transcript