WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B9.9.1 Sequence Name  T25B9.9.1
Length (nt)  1649   Chromosome Location  IV: 10769653-10777743
Chromosome . Primary Identifier  IV Chromosome Location . Start  10769653
Chromosome Location . End  10777743 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B9.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012015 T25B9.9 T25B9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.9 T25B9.9 1455   IV: 10769661-10769990

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.9.1 10769653 10777743 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142367   338   IV: 10769653-10769990 Caenorhabditis elegans
Exon142368   70   IV: 10770114-10770183 Caenorhabditis elegans
Exon142399   441   IV: 10774861-10775301 Caenorhabditis elegans
Exon142400   274   IV: 10775963-10776236 Caenorhabditis elegans
Exon142401   97   IV: 10776291-10776387 Caenorhabditis elegans
Exon142402   99   IV: 10777056-10777154 Caenorhabditis elegans
Exon142403   330   IV: 10777414-10777743 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.9.1 10769653 10777743 1

1 Sequence

Length
1649

1 Sequence Ontology Term

Identifier Name Description
transcript