WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B9.10c.1 Sequence Name  T25B9.10c.1
Length (nt)  1549   Chromosome Location  IV: 10770218-10773911
Chromosome . Primary Identifier  IV Chromosome Location . Start  10770218
Chromosome Location . End  10773911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B9.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012016 inpp-1 T25B9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.10c T25B9.10c 1290   IV: 10770313-10770424

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.10c.1 10770218 10773911 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142369   207   IV: 10770218-10770424 Caenorhabditis elegans
Exon142374   110   IV: 10770787-10770896 Caenorhabditis elegans
Exon142377   246   IV: 10770944-10771189 Caenorhabditis elegans
Exon142380   113   IV: 10771236-10771348 Caenorhabditis elegans
Exon142383   123   IV: 10771411-10771533 Caenorhabditis elegans
Exon142386   131   IV: 10771582-10771712 Caenorhabditis elegans
Exon142389   219   IV: 10771761-10771979 Caenorhabditis elegans
Exon142392   55   IV: 10772028-10772082 Caenorhabditis elegans
Exon142395   144   IV: 10772147-10772290 Caenorhabditis elegans
Exon142398   201   IV: 10773711-10773911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.10c.1 10770218 10773911 -1

1 Sequence

Length
1549

1 Sequence Ontology Term

Identifier Name Description
transcript