WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G8.1.1 Sequence Name  C06G8.1.1
Length (nt)  1485   Chromosome Location  IV: 10778985-10780683
Chromosome . Primary Identifier  IV Chromosome Location . Start  10778985
Chromosome Location . End  10780683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007384 swt-3 C06G8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G8.1 C06G8.1 1068   IV: 10779326-10779687

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G8.1.1 10778985 10780683 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142459   703   IV: 10778985-10779687 Caenorhabditis elegans
Exon142460   614   IV: 10779847-10780460 Caenorhabditis elegans
Exon142461   168   IV: 10780516-10780683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G8.1.1 10778985 10780683 -1

1 Sequence

Length
1485

1 Sequence Ontology Term

Identifier Name Description
transcript