WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13.4a.1 Sequence Name  R13.4a.1
Length (nt)  3404   Chromosome Location  IV: 10812399-10825955
Chromosome . Primary Identifier  IV Chromosome Location . Start  10812399
Chromosome Location . End  10825955 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011259 miz-1 R13.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13.4a R13.4a 2412   IV: 10812428-10812493

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13.4a.1 10812399 10825955 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142454   95   IV: 10812399-10812493 Caenorhabditis elegans
Exon142456   114   IV: 10812900-10813013 Caenorhabditis elegans
Exon142458   106   IV: 10813060-10813165 Caenorhabditis elegans
Exon142460   217   IV: 10813937-10814153 Caenorhabditis elegans
Exon142462   273   IV: 10822655-10822927 Caenorhabditis elegans
Exon142465   97   IV: 10823083-10823179 Caenorhabditis elegans
Exon142468   239   IV: 10823237-10823475 Caenorhabditis elegans
Exon142471   190   IV: 10823523-10823712 Caenorhabditis elegans
Exon142474   118   IV: 10823771-10823888 Caenorhabditis elegans
Exon142478   851   IV: 10823942-10824792 Caenorhabditis elegans
Exon142482   1104   IV: 10824852-10825955 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13.4a.1 10812399 10825955 1

1 Sequence

Length
3404

1 Sequence Ontology Term

Identifier Name Description
transcript