WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13.4c.1 Sequence Name  R13.4c.1
Length (nt)  3372   Chromosome Location  IV: 10812407-10825979
Chromosome . Primary Identifier  IV Chromosome Location . Start  10812407
Chromosome Location . End  10825979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011259 miz-1 R13.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13.4c R13.4c 2364   IV: 10812428-10812493

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13.4c.1 10812407 10825979 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142455   87   IV: 10812407-10812493 Caenorhabditis elegans
Exon142457   114   IV: 10812900-10813013 Caenorhabditis elegans
Exon142459   106   IV: 10813060-10813165 Caenorhabditis elegans
Exon142461   217   IV: 10813937-10814153 Caenorhabditis elegans
Exon142463   273   IV: 10822655-10822927 Caenorhabditis elegans
Exon142467   97   IV: 10823083-10823179 Caenorhabditis elegans
Exon142470   239   IV: 10823237-10823475 Caenorhabditis elegans
Exon142473   190   IV: 10823523-10823712 Caenorhabditis elegans
Exon142476   118   IV: 10823771-10823888 Caenorhabditis elegans
Exon142477   521   IV: 10823942-10824462 Caenorhabditis elegans
Exon142480   282   IV: 10824511-10824792 Caenorhabditis elegans
Exon142483   1128   IV: 10824852-10825979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13.4c.1 10812407 10825979 1

1 Sequence

Length
3372

1 Sequence Ontology Term

Identifier Name Description
transcript