WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R13.2 Sequence Name  R13.2
Length (nt)  618   Chromosome Location  IV: 10826028-10826126
Chromosome . Primary Identifier  IV Chromosome Location . Start  10826028
Chromosome Location . End  10826126
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40774 NPAX-3 22.7 205 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051869
WBRNAi00017804
WBRNAi00034904

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R13.2 10826028 10826126 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011257 npax-3 R13.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R13.2 10826028 10826126 -1
CDS:R13.2 10826169 10826289 -1
CDS:R13.2 10827046 10827107 -1
CDS:R13.2 10827155 10827249 -1
CDS:R13.2 10827294 10827432 -1
CDS:R13.2 10827920 10828021 -1

1 Sequence

Length
618

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13.2.1 R13.2.1 904   IV: 10825870-10828149