WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11G6.5a.1 Sequence Name  T11G6.5a.1
Length (nt)  4519   Chromosome Location  IV: 10835827-10842755
Chromosome . Primary Identifier  IV Chromosome Location . Start  10835827
Chromosome Location . End  10842755 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11G6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011720 T11G6.5 T11G6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11G6.5a T11G6.5a 4221   IV: 10836115-10836233

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.5a.1 10835827 10842755 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142508   407   IV: 10835827-10836233 Caenorhabditis elegans
Exon142510   70   IV: 10836282-10836351 Caenorhabditis elegans
Exon142512   317   IV: 10836404-10836720 Caenorhabditis elegans
Exon142514   199   IV: 10836927-10837125 Caenorhabditis elegans
Exon142516   381   IV: 10837255-10837635 Caenorhabditis elegans
Exon142518   469   IV: 10837679-10838147 Caenorhabditis elegans
Exon142520   270   IV: 10838471-10838740 Caenorhabditis elegans
Exon142522   566   IV: 10838792-10839357 Caenorhabditis elegans
Exon142524   505   IV: 10840024-10840528 Caenorhabditis elegans
Exon142526   212   IV: 10840651-10840862 Caenorhabditis elegans
Exon142530   211   IV: 10840917-10841127 Caenorhabditis elegans
Exon142532   120   IV: 10841175-10841294 Caenorhabditis elegans
Exon142534   152   IV: 10841375-10841526 Caenorhabditis elegans
Exon142536   369   IV: 10841750-10842118 Caenorhabditis elegans
Exon142539   158   IV: 10842174-10842331 Caenorhabditis elegans
Exon142540   113   IV: 10842643-10842755 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.5a.1 10835827 10842755 -1

1 Sequence

Length
4519

1 Sequence Ontology Term

Identifier Name Description
transcript