WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11G6.5b.1 Sequence Name  T11G6.5b.1
Length (nt)  4050   Chromosome Location  IV: 10836115-10842263
Chromosome . Primary Identifier  IV Chromosome Location . Start  10836115
Chromosome Location . End  10842263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11G6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011720 T11G6.5 T11G6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11G6.5b T11G6.5b 4050   IV: 10836115-10836233

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.5b.1 10836115 10842263 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142509   119   IV: 10836115-10836233 Caenorhabditis elegans
Exon142511   70   IV: 10836282-10836351 Caenorhabditis elegans
Exon142513   317   IV: 10836404-10836720 Caenorhabditis elegans
Exon142515   199   IV: 10836927-10837125 Caenorhabditis elegans
Exon142517   381   IV: 10837255-10837635 Caenorhabditis elegans
Exon142519   469   IV: 10837679-10838147 Caenorhabditis elegans
Exon142521   270   IV: 10838471-10838740 Caenorhabditis elegans
Exon142523   566   IV: 10838792-10839357 Caenorhabditis elegans
Exon142525   505   IV: 10840024-10840528 Caenorhabditis elegans
Exon142527   212   IV: 10840651-10840862 Caenorhabditis elegans
Exon142531   211   IV: 10840917-10841127 Caenorhabditis elegans
Exon142533   120   IV: 10841175-10841294 Caenorhabditis elegans
Exon142535   152   IV: 10841375-10841526 Caenorhabditis elegans
Exon142537   369   IV: 10841750-10842118 Caenorhabditis elegans
Exon142538   90   IV: 10842174-10842263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.5b.1 10836115 10842263 -1

1 Sequence

Length
4050

1 Sequence Ontology Term

Identifier Name Description
transcript