WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11G6.4.1 Sequence Name  T11G6.4.1
Length (nt)  1572   Chromosome Location  IV: 10849896-10851933
Chromosome . Primary Identifier  IV Chromosome Location . Start  10849896
Chromosome Location . End  10851933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11G6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011719 T11G6.4 T11G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11G6.4 T11G6.4 1500   IV: 10849964-10850158

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.4.1 10849896 10851933 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142547   263   IV: 10849896-10850158 Caenorhabditis elegans
Exon142548   266   IV: 10850202-10850467 Caenorhabditis elegans
Exon142549   170   IV: 10850512-10850681 Caenorhabditis elegans
Exon142550   74   IV: 10850725-10850798 Caenorhabditis elegans
Exon142551   110   IV: 10850843-10850952 Caenorhabditis elegans
Exon142552   85   IV: 10850999-10851083 Caenorhabditis elegans
Exon142553   327   IV: 10851134-10851460 Caenorhabditis elegans
Exon142555   166   IV: 10851508-10851673 Caenorhabditis elegans
Exon142556   111   IV: 10851823-10851933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.4.1 10849896 10851933 -1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
transcript