WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11G6.1a.1 Sequence Name  T11G6.1a.1
Length (nt)  1795   Chromosome Location  IV: 10858957-10861284
Chromosome . Primary Identifier  IV Chromosome Location . Start  10858957
Chromosome Location . End  10861284 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11G6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002001 hars-1 T11G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11G6.1a T11G6.1a 1575   IV: 10858968-10859075

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.1a.1 10858957 10861284 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142584   119   IV: 10858957-10859075 Caenorhabditis elegans
Exon142586   552   IV: 10859465-10860016 Caenorhabditis elegans
Exon142588   409   IV: 10860065-10860473 Caenorhabditis elegans
Exon142590   449   IV: 10860521-10860969 Caenorhabditis elegans
Exon142593   266   IV: 10861019-10861284 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11G6.1a.1 10858957 10861284 1

1 Sequence

Length
1795

1 Sequence Ontology Term

Identifier Name Description
transcript