WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13E9.1.1 Sequence Name  F13E9.1.1
Length (nt)  2016   Chromosome Location  IV: 10864331-10873635
Chromosome . Primary Identifier  IV Chromosome Location . Start  10864331
Chromosome Location . End  10873635 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13E9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008750 nish-1 F13E9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13E9.1 F13E9.1 1494   IV: 10864331-10864429

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13E9.1.1 10864331 10873635 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142601   99   IV: 10864331-10864429 Caenorhabditis elegans
Exon142602   285   IV: 10864961-10865245 Caenorhabditis elegans
Exon142610   160   IV: 10870864-10871023 Caenorhabditis elegans
Exon142611   161   IV: 10871472-10871632 Caenorhabditis elegans
Exon142612   219   IV: 10871723-10871941 Caenorhabditis elegans
Exon142613   131   IV: 10872383-10872513 Caenorhabditis elegans
Exon142614   390   IV: 10872629-10873018 Caenorhabditis elegans
Exon142615   571   IV: 10873065-10873635 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13E9.1.1 10864331 10873635 1

1 Sequence

Length
2016

1 Sequence Ontology Term

Identifier Name Description
transcript