WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK593.1a.1 Sequence Name  ZK593.1a.1
Length (nt)  1651   Chromosome Location  IV: 10909915-10913071
Chromosome . Primary Identifier  IV Chromosome Location . Start  10909915
Chromosome Location . End  10913071 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK593.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014001 pyk-2 ZK593.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK593.1a ZK593.1a 1548   IV: 10909946-10909968

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.1a.1 10909915 10913071 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142680   54   IV: 10909915-10909968 Caenorhabditis elegans
Exon142681   196   IV: 10910036-10910231 Caenorhabditis elegans
Exon142684   515   IV: 10910818-10911332 Caenorhabditis elegans
Exon142688   358   IV: 10911396-10911753 Caenorhabditis elegans
Exon142691   167   IV: 10912419-10912585 Caenorhabditis elegans
Exon142694   119   IV: 10912634-10912752 Caenorhabditis elegans
Exon142698   242   IV: 10912830-10913071 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.1a.1 10909915 10913071 1

1 Sequence

Length
1651

1 Sequence Ontology Term

Identifier Name Description
transcript