WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK593.4a.1 Sequence Name  ZK593.4a.1
Length (nt)  5098   Chromosome Location  IV: 10920070-10926817
Chromosome . Primary Identifier  IV Chromosome Location . Start  10920070
Chromosome Location . End  10926817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK593.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004319 rbr-2 ZK593.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK593.4a ZK593.4a 4434   IV: 10920107-10920250

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.4a.1 10920070 10926817 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142717   181   IV: 10920070-10920250 Caenorhabditis elegans
Exon142720   132   IV: 10920301-10920432 Caenorhabditis elegans
Exon142721   437   IV: 10920692-10921128 Caenorhabditis elegans
Exon142723   188   IV: 10921357-10921544 Caenorhabditis elegans
Exon142725   2011   IV: 10921594-10923604 Caenorhabditis elegans
Exon142727   188   IV: 10923768-10923955 Caenorhabditis elegans
Exon142729   296   IV: 10924002-10924297 Caenorhabditis elegans
Exon142731   656   IV: 10924729-10925384 Caenorhabditis elegans
Exon142733   299   IV: 10925430-10925728 Caenorhabditis elegans
Exon142736   710   IV: 10926108-10926817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.4a.1 10920070 10926817 1

1 Sequence

Length
5098

1 Sequence Ontology Term

Identifier Name Description
transcript