WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK593.5d.1 Sequence Name  ZK593.5d.1
Length (nt)  4273   Chromosome Location  IV: 10926721-10933203
Chromosome . Primary Identifier  IV Chromosome Location . Start  10926721
Chromosome Location . End  10933203 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK593.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001017 dnc-1 ZK593.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK593.5d ZK593.5d 3972   IV: 10926924-10927070

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.5d.1 10926721 10933203 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142761   350   IV: 10926721-10927070 Caenorhabditis elegans
Exon142766   547   IV: 10927268-10927814 Caenorhabditis elegans
Exon142771   719   IV: 10928329-10929047 Caenorhabditis elegans
Exon142777   432   IV: 10929095-10929526 Caenorhabditis elegans
Exon142782   538   IV: 10929574-10930111 Caenorhabditis elegans
Exon142787   77   IV: 10930161-10930237 Caenorhabditis elegans
Exon142792   741   IV: 10930632-10931372 Caenorhabditis elegans
Exon142797   209   IV: 10931630-10931838 Caenorhabditis elegans
Exon142801   70   IV: 10931882-10931951 Caenorhabditis elegans
Exon142806   75   IV: 10932479-10932553 Caenorhabditis elegans
Exon142809   102   IV: 10932595-10932696 Caenorhabditis elegans
Exon142813   284   IV: 10932745-10933028 Caenorhabditis elegans
Exon142818   129   IV: 10933075-10933203 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK593.5d.1 10926721 10933203 -1

1 Sequence

Length
4273

1 Sequence Ontology Term

Identifier Name Description
transcript